Publications

Chris Marshall, Erin S Gloag, Christina Lim, Daniel J Wozniak, Vaughn S Cooper (2021). Rampant prophage movement among transient competitors drives rapid adaptation during infection. bioRxiv.

PDF Cite Code Source Document

Alfonso Santos-Lopez, Christopher W Marshall, Allison L Welp, Caroline B Turner, Javier Rasero, Vaughn S Cooper (2020). The roles of history, chance, and natural selection in the evolution of antibiotic resistance. bioRxiv.

Michelle R Scribner, Alfonso Santos-Lopez, Christopher W Marshall, Christopher Deitrick, Vaughn S Cooper (2020). Parallel evolution of tobramycin resistance across species and environments. Mbio.

Matthew M Schaefers, Benjamin X Wang, Nicole M Boisvert, Sarah J Martini, Sarah L Bonney, Christopher W Marshall, Michael T Laub, Vaughn S Cooper, Gregory P Priebe (2020). Host adaptations in the fixLJ pathway of the Burkholderia cepacia complex increase virulence. bioRxiv.

Alfonso Santos-Lopez, Melissa J Fritz, Jeffrey Lombardo, Ansen HP Burr, Victoria A Heinrich, Christopher W Marshall, Vaughn S Cooper (2020). Experimental evolution to identify undescribed mechanisms of resistance to a novel cationic peptide antibiotic. bioRxiv.

Catherine R Armbruster, Christopher W Marshall, Jeffrey A Melvin, Anna C Zemke, Arkadiy I Garber, John Moore, Kelvin Li, Paula F Zamora, Ian L Fritz, Christopher D Manko, others (2020). Evolution and adaptation of Pseudomonas aeruginosa in the paranasal sinuses of people with cystic fibrosis. bioRxiv.

Nidhi Gupta, Kelly A Skinner, Zarath M Summers, Janaka N Edirisinghe, José P Faria, Christopher W Marshall, Anukriti Sharma, Neil R Gottel, Jack A Gilbert, Christopher S Henry, others (2020). Draft Genome Sequence of 2-Methylpyridine-, 2-Ethylpyridine-, and 2-Hydroxypyridine-Degrading Arthrobacter sp. Strain ATCC 49987. Microbiology resource announcements.

CR Armbruster, CW Marshall, JA Melvin, A Zemke, J Moore, K Li, PF Zamora, C Manko, JR Gaston, A Morris, others (2020). DIFFERENT EVOLUTIONARY-GENETIC ROUTES TO PARALLEL PATHOADAPTATION OF PSEUDOMONAS AERUGINOSA IN THE UPPER RESPIRATORY TRACT IN CYSTIC FIBROSIS. PEDIATRIC PULMONOLOGY.

Daniel E Ross, Christopher W Marshall, Djuna Gulliver, Harold D May, R Sean Norman (2020). Defining Genomic and Predicted Metabolic Features of the Acetobacterium Genus. Msystems.

Rayford B Payne, Upal Ghosh, Harold D May, Christopher W Marshall, Kevin R Sowers (2019). Response to “Comment on ‘A Pilot-Scale Field Study: In Situ Treatment of PCB-Impacted Sediments with Bioamended Activated Carbon’”. Environmental science & technology.

Erin S Gloag, Christopher W Marshall, Daniel Snyder, Gina R Lewin, Jacob S Harris, Alfonso Santos-Lopez, Sarah B Chaney, Marvin Whiteley, Vaughn S Cooper, Daniel J Wozniak (2019). Pseudomonas aeruginosa interstrain dynamics and selection of hyperbiofilm mutants during a chronic infection. MBio.

Edward V LaBelle, Christopher W Marshall, Harold D May (2019). Microbiome for the electrosynthesis of chemicals from carbon dioxide. Accounts of chemical research.

Alfonso Santos-Lopez, Christopher W Marshall, Michelle R Scribner, Daniel J Snyder, Vaughn S Cooper (2019). Evolutionary pathways to antibiotic resistance are dependent upon environmental structure and bacterial lifestyle. Elife.

Nidhi Gupta, Kelly A Skinner, Zarath M Summers, Janaka N Edirisinghe, José P Faria, Christopher W Marshall, Anukriti Sharma, Neil R Gottel, Jack A Gilbert, Christopher S Henry, others (2019). Draft genome sequence of Rhodococcus sp. strain ATCC 49988, a quinoline-degrading bacterium. Microbiology resource announcements.

Rayford B Payne, Upal Ghosh, Harold D May, Christopher W Marshall, Kevin R Sowers (2019). A pilot-scale field study: in situ treatment of PCB-impacted sediments with bioamended activated carbon. Environmental science & technology.

Santiago MC Lopez, Judith M Martin, Monika Johnson, Marcia Kurs-Lasky, William T Horne, Christopher W Marshall, Vaughn S Cooper, John V Williams, Nader Shaikh (2019). A method of processing nasopharyngeal swabs to enable multiple testing. Pediatric research.

Mustapha M Mustapha, Bin Li, Marissa P Pacey, Roberta T Mettus, Christi L McElheny, Christopher W Marshall, Robert K Ernst, Vaughn S Cooper, Yohei Doi (2018). Phylogenomics of colistin-susceptible and resistant XDR Acinetobacter baumannii. Journal of Antimicrobial Chemotherapy.

Caroline B Turner, Christopher W Marshall, Vaughn S Cooper (2018). Parallel genetic adaptation across environments differing in mode of growth or resource availability. Evolution letters.

Daniel G Dunlap, Christopher W Marshall, Adam Fitch, Sarah F Rapport, Vaughn S Cooper, Bryan J McVerry, Alison Morris, Georgios D Kitsios (2018). Improved detection of culprit pathogens by bacterial DNA sequencing affects antibiotic management decisions in severe pneumonia. The American journal of case reports.

Jeffrey A Melvin, Jordan R Gaston, Shawn N Phillips, Michael J Springer, Christopher W Marshall, Robert MQ Shanks, Jennifer M Bomberger (2017). Pseudomonas aeruginosa contact-dependent growth inhibition plays dual role in host-pathogen interactions. MSphere.

Daniel E Ross, Christopher W Marshall, Harold D May, R Sean Norman (2017). Metagenome-assembled genome sequences of Acetobacterium sp. strain MES1 and Desulfovibrio sp. strain MES5 from a cathode-associated acetogenic microbial community. Genome announcements.

Christopher W Marshall, Daniel E Ross, Kim M Handley, Pamela B Weisenhorn, Janaka N Edirisinghe, Christopher S Henry, Jack A Gilbert, Harold D May, R Sean Norman (2017). Metabolic reconstruction and modeling microbial electrosynthesis. Scientific reports.

Rayford B Payne, Upal Ghosh, Harold D May, Christopher W Marshall, Kevin R Sowers (2017). Mesocosm studies on the efficacy of bioamended activated carbon for treating PCB-impacted sediment. Environmental science & technology.

Haitao Wang, Christopher W Marshall, Minying Cheng, Huijuan Xu, Hu Li, Xiaoru Yang, Tianling Zheng (2017). Changes in land use driven by urbanization impact nitrogen cycling and the microbial community composition in soils. Scientific reports.

Guo-Wei Zhou, Xiao-Ru Yang, Christopher W Marshall, Hu Li, Bang-Xiao Zheng, Yu Yan, Jian-Qiang Su, Yong-Guan Zhu (2017). Biochar addition increases the rates of dissimilatory iron reduction and methanogenesis in ferrihydrite enrichments. Frontiers in microbiology.

Xiao-Ru Yang, Bo-Sen Weng, Hu Li, Christopher W Marshall, Hong Li, Yong-Shan Chen, Shen Yu, Gui-Bing Zhu, Yong-Guan Zhu (2017). An overlooked nitrogen loss linked to anaerobic ammonium oxidation in estuarine sediments in China. Journal of Soils and Sediments.

Christopher W Marshall, Sarah L O'Brien, Pamela Weisenhorn, Jack A Gilbert, Edward J O'Loughlin, Theodore M Flynn, Neil R Gottel, Silvia Alvarez Clare, Kenneth M Kemner, Aaron A Best (2016). Microbial ecology of restored floodplains. 101st ESA Annual Meeting (August 7–12, 2016).

Guo-Wei Zhou, Xiao-Ru Yang, Hu Li, Christopher W Marshall, Bang-Xiao Zheng, Yu Yan, Jian-Qiang Su, Yong-Guan Zhu (2016). Electron shuttles enhance anaerobic ammonium oxidation coupled to iron (III) reduction. Environmental science & technology.

Daniel E Ross, Christopher W Marshall, Harold D May, R Sean Norman (2016). Comparative genomic analysis of Sulfurospirillum cavolei MES reconstructed from the metagenome of an electrosynthetic microbiome. PLoS One.

Ilia Burgsdorf, Beate M Slaby, Kim M Handley, Markus Haber, Jochen Blom, Christopher W Marshall, Jack A Gilbert, Ute Hentschel, Laura Steindler (2015). Lifestyle evolution in cyanobacterial symbionts of sponges. MBio.

Daniel E Ross, Christopher W Marshall, Harold D May, R Sean Norman (2015). Draft genome sequence of Sulfurospirillum sp. strain MES, reconstructed from the metagenome of a microbial electrosynthesis system. Genome announcements.

Harold May, Christopher Marshall, Edward LaBelle (2014). Microbial electrosynthetic cells.

Edward V LaBelle, Christopher W Marshall, Jack A Gilbert, Harold D May (2014). Influence of acidic pH on hydrogen and acetate production by an electrosynthetic microbiome. PloS one.

Christopher W Marshall, Edward V LaBelle, Harold D May (2013). Production of fuels and chemicals from waste by microbiomes. Current opinion in biotechnology.

Christopher William Marshall (2013). Microbial Extracellular Electron Transfer: MEET Applications for Biotechnology.

Christopher W Marshall, Daniel E Ross, Erin B Fichot, R Sean Norman, Harold D May (2013). Long-term operation of microbial electrosynthesis systems improves acetate production by autotrophic microbiomes. Environmental science & technology.

Christopher W Marshall, Daniel E Ross, Erin B Fichot, R Sean Norman, Harold D May (2012). Electrosynthesis of commodity chemicals by an autotrophic microbial community. Applied and environmental microbiology.

Kevin R Sowers, Harold D May, Chanlan Chun, Chrisopher William Marshall (2011). Thermophilic methanogenic consortium for conversion of cellulosic biomass to bioenergy.

Christopher W Marshall, Harold D May (2009). Electrochemical evidence of direct electrode reduction by a thermophilic Gram-positive bacterium, Thermincola ferriacetica. Energy & Environmental Science.

BJ Mathis, CW Marshall, CE Milliken, RS Makkar, SE Creager, HD May (2008). Electricity generation by thermophilic microorganisms from marine sediment. Applied microbiology and biotechnology.